Creating blastn filesΒΆ


Make sure blastn is properly installed before running!

  1. Download the allele list and the _gen and _nuc fasta files for each locus
  2. Create the blast files by running the ngs-imgt-db perl script
$ ngs-imgt-db -i /path/to/imgt/files -o /output/dir
  1. Add the new blast files to the seqann/data/blast directory and check them in.